Ubiquitin System — Tree (Dunaliella salina)

Ubiquitin System (Dunaliella salina)

Method. Proteins were annotated using UUCD-derived HMM profiles and family-specific score cutoffs with HMMER (hmmsearch).

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+DUB(23 genes, 2 categories)
- +JAMM(1 genes)
  - Dusal.1103s00001.v1.0
- +USP(22 genes)
+E1(4 genes)
+E2(22 genes, 2 categories)
- +UBC(21 genes)
- +UEV(1 genes)
  - Dusal.0779s00001.v1.0
+E3_activity(98 genes, 3 categories)
+E3_adaptor(242 genes, 1 categories)
- +Cullin_RING(242 genes, 5 categories)
+UBD(93 genes, 4 categories)
+ULD(49 genes, 2 categories)
- +UBL(6 genes, 2 categories)
  - +ATG8(1 genes)
    - Dusal.0066s00009.v1.0
  - +NEDD8(5 genes)
- +UDP(43 genes, 2 categories)
  - +UBQ(39 genes, 2 categories)
    - +UBQ_Other(28 genes)
    - +UBQ_PIM(11 genes)
  - +UFD(4 genes, 1 categories)
    - +UBX(4 genes)