HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact

Transcription factors & regulators (Oryza coarctata)

Method. Transcription factors and regulators were predicted by iTAK.

Transcription factor families
Alfin-like (18)AP2/ERF-AP2 (33)AP2/ERF-ERF (224)AP2/ERF-RAV (10)B3 (65)B3-ARF (45)BBR-BPC (7)BES1 (13)bHLH (238)bZIP (135)C2C2-CO-like (18)C2C2-Dof (58)C2C2-GATA (54)C2C2-LSD (9)C2C2-YABBY (16)C2H2 (183)C3H (91)CAMTA (12)CPP (17)CSD (3)DBB (10)DBP (7)DDT (10)E2F-DP (18)EIL (11)FAR1 (51)GARP-ARR-B (13)GARP-G2-like (88)GeBP (24)GRAS (91)GRF (23)HB-BELL (26)HB-HD-ZIP (76)HB-KNOX (21)HB-other (21)HB-PHD (2)HB-WOX (24)HRT (2)HSF (48)LFY (2)LIM (11)LOB (58)MADS-M-type (38)MADS-MIKC (63)MYB (222)MYB-related (105)NAC (231)NF-X1 (4)NF-YA (21)NF-YB (19)NF-YC (23)OFP (59)PLATZ (23)RWP-RK (20)S1Fa-like (5)SBP (38)SRS (10)STAT (1)TCP (37)Tify (22)Trihelix (50)TUB (26)ULT (4)VOZ (2)Whirly (4)WRKY (176)zf-HD (27)
Transcription regulator families
ARID (16)AUX/IAA (56)Coactivator p15 (4)GNAT (46)HMG (17)IWS1 (29)Jumonji (19)LUG (10)MBF1 (3)MED6 (2)MED7 (1)mTERF (53)Others (112)PHD (56)Pseudo ARR-B (8)RB (4)Rcd1-like (7)SET (64)SNF2 (58)SOH1 (2)SWI/SNF-BAF60b (25)SWI/SNF-SWI3 (8)TAZ (10)TRAF (84)
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2026 All Rights Reserved.