halophFGD - Protein Kinase Tree (Shiu)

Protein Kinases (Thalassia testudinum)

Method. Protein kinases were predicted by iTAK.

Download Gene List (TXT) Download Sequences (FASTA)

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+ Group AGC (33 genes, 6 families)
- + AGC-Pl 2
  - gene.Thate06g06530
  - gene.Thate08g16400
- + AGC_MAST 4
- + AGC_NDR 4
- + AGC_PDK1 1
  - gene.Thate09g01480
- + AGC_PKA-PKG 1
  - gene.Thate03g16300
- + AGC_RSK-2 21
+ Group CAMK (64 genes, 5 families)
- + CAMK_AMPK 1
  - gene.Thate08g02850
- + CAMK_CAMKL-CHK1 15
- + CAMK_CAMKL-LKB 1
  - gene.Thate08g24960
- + CAMK_CDPK 42
- + CAMK_OST1L 5
+ Group CK1 (9 genes, 2 families)
- + CK1_CK1 4
- + CK1_CK1-Pl 5
+ Group CMGC (64 genes, 16 families)
- + CMGC_CDK-CCRK 1
  - gene.Thate02g25230
- + CMGC_CDK-CDK7 1
  - gene.Thate06g22370
- + CMGC_CDK-CDK8 1
  - gene.Thate04g15750
- + CMGC_CDK-CRK7-CDK9 8
- + CMGC_CDK-PITSLRE 2
  - gene.Thate01g15480
  - gene.Thate06g10700
- + CMGC_CDK-Pl 8
- + CMGC_CDKL-Cr 1
  - gene.Thate05g00690
- + CMGC_CK2 3
- + CMGC_CLK 4
- + CMGC_DYRK-PRP4 4
- + CMGC_DYRK-YAK 1
  - gene.Thate02g05220
- + CMGC_GSK 10
- + CMGC_MAPK 12
- + CMGC_Pl-Tthe 1
  - gene.Thate01g02000
- + CMGC_RCK 3
- + CMGC_SRPK 4
+ Group Others (28 genes, 14 families)
- + Aur 1
  - gene.Thate05g12530
- + BUB 1
  - gene.Thate07g19530
- + IRE1 1
  - gene.Thate08g17200
- + NAK 4
- + NEK 4
- + PEK_GCN2 1
  - gene.Thate03g21560
- + PEK_PEK 1
  - gene.Thate07g17950
- + SCY1_SCYL2 1
  - gene.Thate09g14920
- + TLK 1
  - gene.Thate02g39940
- + TTK 1
  - gene.Thate05g04240
- + ULK_Fused 1
  - gene.Thate01g33610
- + ULK_ULK4 1
  - gene.Thate01g03590
- + WEE 1
  - gene.Thate07g20150
- + WNK_NRBP 9
+ Group Plant-specific (5 genes, 3 families)
- + Group-Pl-2 1
  - gene.Thate01g05240
- + Group-Pl-3 1
  - gene.Thate01g34550
- + Group-Pl-4 3
+ Group RLK-Pelle (523 genes, 54 families)
- + RLK-Pelle_C-LEC 1
  - gene.Thate09g11860
- + RLK-Pelle_CR4L 7
  - gene.Thate02g16890
  - gene.Thate03g21570
  - gene.Thate04g12860
  - gene.Thate05g08730
  - gene.Thate06g05310
  - gene.Thate06g22190
  - gene.Thate07g12730
- + RLK-Pelle_CrRLK1L-1 45
  - gene.Thate01g01660
  - gene.Thate01g01680
  - gene.Thate01g07530
  - gene.Thate01g14350
  - gene.Thate01g18890
  - gene.Thate01g20260
  - gene.Thate01g28530
  - gene.Thate01g29750
  - gene.Thate01g33420
  - gene.Thate02g19640
  - gene.Thate02g22870
  - gene.Thate02g32230
  - gene.Thate03g01880
  - gene.Thate03g09010
  - gene.Thate03g09480
  - gene.Thate03g10410
  - gene.Thate03g19080
  - gene.Thate03g26140
  - gene.Thate04g00820
  - gene.Thate04g06370
  - gene.Thate04g09350
  - gene.Thate04g14130
  - gene.Thate04g17040
  - gene.Thate04g19550
  - gene.Thate04g19600
  - gene.Thate04g22460
  - gene.Thate04g25190
  - gene.Thate04g27010
  - gene.Thate04g27800
  - gene.Thate04g29760
  - gene.Thate05g07220
  - gene.Thate05g23100
  - gene.Thate05g23140
  - gene.Thate06g01620
  - gene.Thate06g20020
  - gene.Thate06g20030
  - gene.Thate06g22380
  - gene.Thate07g11870
  - gene.Thate07g13570
  - gene.Thate08g02930
  - gene.Thate09g02640
  - gene.Thate09g02680
  - gene.Thate09g03770
  - gene.Thate09g17690
  - gene.Thate09g20760
- + RLK-Pelle_DLSV 74
  - gene.Thate01g06410
  - gene.Thate01g14710
  - gene.Thate01g34880
  - gene.Thate02g00940
  - gene.Thate04g00240
  - gene.Thate04g03390
  - gene.Thate04g03420
  - gene.Thate04g03430
  - gene.Thate04g03440
  - gene.Thate04g03450
  - gene.Thate04g03460
  - gene.Thate04g04050
  - gene.Thate04g04060
  - gene.Thate04g04090
  - gene.Thate04g04260
  - gene.Thate04g04300
  - gene.Thate04g04310
  - gene.Thate04g04320
  - gene.Thate04g04330
  - gene.Thate04g04340
  - gene.Thate04g04350
  - gene.Thate04g04370
  - gene.Thate04g04710
  - gene.Thate04g04730
  - gene.Thate04g17580
  - gene.Thate05g03470
  - gene.Thate05g19430
  - gene.Thate05g20080
  - gene.Thate05g20090
  - gene.Thate05g20130
  - gene.Thate05g20160
  - gene.Thate05g20170
  - gene.Thate05g20180
  - gene.Thate05g23270
  - gene.Thate05g23360
  - gene.Thate05g28710
  - gene.Thate05g28760
  - gene.Thate05g28770
  - gene.Thate05g28780
  - gene.Thate05g29160
  - gene.Thate05g29170
  - gene.Thate05g29180
  - gene.Thate05g29200
  - gene.Thate05g29220
  - gene.Thate05g29230
  - gene.Thate05g29460
  - gene.Thate06g10920
  - gene.Thate07g01690
  - gene.Thate07g05420
  - gene.Thate07g19050
  - gene.Thate07g19070
  - gene.Thate07g19140
  - gene.Thate07g19550
  - gene.Thate07g19560
  - gene.Thate07g19890
  - gene.Thate07g19900
  - gene.Thate07g19910
  - gene.Thate07g19930
  - gene.Thate07g19940
  - gene.Thate07g19950
  - gene.Thate07g19970
  - gene.Thate07g19980
  - gene.Thate07g19990
  - gene.Thate07g20000
  - gene.Thate07g20010
  - gene.Thate07g20030
  - gene.Thate07g20040
  - gene.Thate07g20060
  - gene.Thate07g20080
  - gene.Thate07g20100
  - gene.Thate07g20110
  - gene.Thate07g20120
  - gene.Thate08g01020
  - gene.Thate08g03700
- + RLK-Pelle_Extensin 6
  - gene.Thate03g07150
  - gene.Thate03g13420
  - gene.Thate04g06010
  - gene.Thate06g18680
  - gene.Thate07g09690
  - gene.Thate08g24170
- + RLK-Pelle_L-LEC 47
  - gene.Thate01g00010
  - gene.Thate01g00030
  - gene.Thate01g00050
  - gene.Thate01g00060
  - gene.Thate01g00070
  - gene.Thate01g00080
  - gene.Thate01g00110
  - gene.Thate01g00120
  - gene.Thate01g10320
  - gene.Thate01g10330
  - gene.Thate01g31340
  - gene.Thate01g31350
  - gene.Thate01g31360
  - gene.Thate01g31370
  - gene.Thate01g32800
  - gene.Thate02g31270
  - gene.Thate02g31280
  - gene.Thate02g31290
  - gene.Thate02g41370
  - gene.Thate03g05530
  - gene.Thate04g06460
  - gene.Thate04g22860
  - gene.Thate05g06560
  - gene.Thate06g00410
  - gene.Thate06g03010
  - gene.Thate06g23910
  - gene.Thate06g23930
  - gene.Thate06g23940
  - gene.Thate06g24690
  - gene.Thate06g24740
  - gene.Thate06g24800
  - gene.Thate06g24820
  - gene.Thate06g24880
  - gene.Thate06g24900
  - gene.Thate06g24920
  - gene.Thate07g00890
  - gene.Thate07g00930
  - gene.Thate08g00150
  - gene.Thate08g00170
  - gene.Thate08g19170
  - gene.Thate08g19380
  - gene.Thate08g19390
  - gene.Thate09g07480
  - gene.Thate09g07740
  - gene.Thate09g07750
  - gene.Thate09g09400
  - gene.Thate09g17180
- + RLK-Pelle_LRK10L-2 4
  - gene.Thate01g27670
  - gene.Thate03g01010
  - gene.Thate03g01030
  - gene.Thate03g01050
- + RLK-Pelle_LRR-I-1 7
  - gene.Thate04g03610
  - gene.Thate04g03620
  - gene.Thate06g01840
  - gene.Thate07g16700
  - gene.Thate07g17160
  - gene.Thate09g07190
  - gene.Thate09g07200
- + RLK-Pelle_LRR-I-2 4
  - gene.Thate04g27210
  - gene.Thate05g22120
  - gene.Thate05g23630
  - gene.Thate07g18980
- + RLK-Pelle_LRR-II 8
  - gene.Thate02g35520
  - gene.Thate03g06000
  - gene.Thate04g10570
  - gene.Thate04g27270
  - gene.Thate05g11220
  - gene.Thate05g11960
  - gene.Thate09g00750
  - gene.Thate09g11040
- + RLK-Pelle_LRR-III 37
  - gene.Thate01g04570
  - gene.Thate01g11620
  - gene.Thate01g11630
  - gene.Thate01g11640
  - gene.Thate01g11980
  - gene.Thate01g27520
  - gene.Thate01g27760
  - gene.Thate01g29730
  - gene.Thate01g29850
  - gene.Thate01g29860
  - gene.Thate01g31960
  - gene.Thate02g08360
  - gene.Thate02g16620
  - gene.Thate02g25670
  - gene.Thate03g17540
  - gene.Thate03g20150
  - gene.Thate04g00550
  - gene.Thate04g04130
  - gene.Thate04g06860
  - gene.Thate04g24080
  - gene.Thate04g25660
  - gene.Thate04g26270
  - gene.Thate05g19370
  - gene.Thate05g23660
  - gene.Thate06g03080
  - gene.Thate06g06470
  - gene.Thate06g07950
  - gene.Thate06g15330
  - gene.Thate06g21980
  - gene.Thate07g06880
  - gene.Thate07g16120
  - gene.Thate08g16650
  - gene.Thate08g18350
  - gene.Thate08g20630
  - gene.Thate08g23860
  - gene.Thate09g12750
  - gene.Thate09g20430
- + RLK-Pelle_LRR-IV 3
  - gene.Thate01g24940
  - gene.Thate05g01490
  - gene.Thate08g09300
- + RLK-Pelle_LRR-IX 6
  - gene.Thate02g18620
  - gene.Thate04g02180
  - gene.Thate04g22060
  - gene.Thate05g24760
  - gene.Thate07g06660
  - gene.Thate09g01890
- + RLK-Pelle_LRR-V 9
  - gene.Thate01g10510
  - gene.Thate03g21000
  - gene.Thate04g04820
  - gene.Thate04g25420
  - gene.Thate04g28260
  - gene.Thate05g26150
  - gene.Thate05g28650
  - gene.Thate06g07110
  - gene.Thate06g07130
- + RLK-Pelle_LRR-VI-1 6
  - gene.Thate01g15330
  - gene.Thate02g29020
  - gene.Thate02g40110
  - gene.Thate03g24210
  - gene.Thate06g10660
  - gene.Thate09g13900
- + RLK-Pelle_LRR-VI-2 7
  - gene.Thate01g01360
  - gene.Thate01g06600
  - gene.Thate01g32210
  - gene.Thate02g35940
  - gene.Thate03g11280
  - gene.Thate07g12580
  - gene.Thate07g18130
- + RLK-Pelle_LRR-VII-1 4
  - gene.Thate04g22810
  - gene.Thate06g03710
  - gene.Thate09g03740
  - gene.Thate09g12830
- + RLK-Pelle_LRR-VII-2 2
  - gene.Thate02g23020
  - gene.Thate04g09680
- + RLK-Pelle_LRR-VII-3 1
  - gene.Thate08g19700
- + RLK-Pelle_LRR-VIII-1 5
  - gene.Thate01g29610
  - gene.Thate04g21010
  - gene.Thate04g21050
  - gene.Thate06g05970
  - gene.Thate06g06390
- + RLK-Pelle_LRR-Xa 2
  - gene.Thate04g07200
  - gene.Thate04g26240
- + RLK-Pelle_LRR-Xb-1 8
  - gene.Thate01g10290
  - gene.Thate02g01030
  - gene.Thate03g19520
  - gene.Thate04g21740
  - gene.Thate05g14010
  - gene.Thate05g25160
  - gene.Thate08g03980
  - gene.Thate09g18080
- + RLK-Pelle_LRR-Xb-2 1
  - gene.Thate02g21290
- + RLK-Pelle_LRR-XI-1 30
  - gene.Thate01g04640
  - gene.Thate02g08770
  - gene.Thate02g31550
  - gene.Thate02g31570
  - gene.Thate02g37780
  - gene.Thate03g05660
  - gene.Thate03g07430
  - gene.Thate03g12070
  - gene.Thate03g19340
  - gene.Thate03g23060
  - gene.Thate04g01170
  - gene.Thate04g08490
  - gene.Thate04g10900
  - gene.Thate04g17840
  - gene.Thate05g08740
  - gene.Thate06g14080
  - gene.Thate06g14140
  - gene.Thate07g16860
  - gene.Thate08g00720
  - gene.Thate08g19500
  - gene.Thate08g21470
  - gene.Thate08g23830
  - gene.Thate08g24000
  - gene.Thate08g24320
  - gene.Thate09g02880
  - gene.Thate09g08720
  - gene.Thate09g11480
  - gene.Thate09g16420
  - gene.Thate09g16430
  - gene.Thate09g17550
- + RLK-Pelle_LRR-XI-2 2
  - gene.Thate04g02390
  - gene.Thate05g10360
- + RLK-Pelle_LRR-XII-1 9
  - gene.Thate03g07980
  - gene.Thate03g08010
  - gene.Thate04g00180
  - gene.Thate04g10090
  - gene.Thate04g24940
  - gene.Thate08g23540
  - gene.Thate08g23560
  - gene.Thate08g23580
  - gene.Thate09g20290
- + RLK-Pelle_LRR-XIIIa 2
  - gene.Thate02g14230
  - gene.Thate05g07290
- + RLK-Pelle_LRR-XIIIb 2
  - gene.Thate02g05590
  - gene.Thate05g25620
- + RLK-Pelle_LRR-XIV 2
  - gene.Thate05g28400
  - gene.Thate06g14220
- + RLK-Pelle_LRR-XV 2
  - gene.Thate02g29620
  - gene.Thate08g13590
- + RLK-Pelle_LysM 5
  - gene.Thate02g24940
  - gene.Thate05g10650
  - gene.Thate06g21590
  - gene.Thate08g21180
  - gene.Thate08g22180
- + RLK-Pelle_PERK-1 13
  - gene.Thate02g22420
  - gene.Thate02g31910
  - gene.Thate02g34100
  - gene.Thate03g03070
  - gene.Thate03g03520
  - gene.Thate03g03530
  - gene.Thate03g16600
  - gene.Thate03g16630
  - gene.Thate03g24300
  - gene.Thate06g14390
  - gene.Thate07g16430
  - gene.Thate08g15650
  - gene.Thate09g15840
- + RLK-Pelle_PERK-2 3
  - gene.Thate06g13370
  - gene.Thate07g17230
  - gene.Thate09g07280
- + RLK-Pelle_RLCK-II 2
  - gene.Thate01g31310
  - gene.Thate06g03700
- + RLK-Pelle_RLCK-IV 6
  - gene.Thate01g18410
  - gene.Thate01g21910
  - gene.Thate01g34790
  - gene.Thate02g00460
  - gene.Thate03g21170
  - gene.Thate05g01500
- + RLK-Pelle_RLCK-IXa 2
  - gene.Thate01g26360
  - gene.Thate05g08330
- + RLK-Pelle_RLCK-IXb 15
  - gene.Thate01g00360
  - gene.Thate01g06730
  - gene.Thate02g28560
  - gene.Thate02g33510
  - gene.Thate03g11000
  - gene.Thate03g18860
  - gene.Thate03g21980
  - gene.Thate04g23990
  - gene.Thate07g06910
  - gene.Thate07g13830
  - gene.Thate08g01700
  - gene.Thate08g01710
  - gene.Thate08g20690
  - gene.Thate08g22530
  - gene.Thate09g14340
- + RLK-Pelle_RLCK-V 10
  - gene.Thate02g23980
  - gene.Thate03g02080
  - gene.Thate05g00580
  - gene.Thate05g14560
  - gene.Thate06g11310
  - gene.Thate06g11570
  - gene.Thate06g14310
  - gene.Thate06g19360
  - gene.Thate08g05890
  - gene.Thate08g09470
- + RLK-Pelle_RLCK-VI 7
  - gene.Thate02g07480
  - gene.Thate02g30140
  - gene.Thate06g16760
  - gene.Thate06g22790
  - gene.Thate08g21590
  - gene.Thate09g01290
  - gene.Thate09g18670
- + RLK-Pelle_RLCK-VIIa-1 12
  - gene.Thate01g01610
  - gene.Thate01g01830
  - gene.Thate01g33230
  - gene.Thate02g12930
  - gene.Thate02g27240
  - gene.Thate05g10000
  - gene.Thate05g21930
  - gene.Thate06g02080
  - gene.Thate07g12820
  - gene.Thate08g07870
  - gene.Thate08g12590
  - gene.Thate08g17400
- + RLK-Pelle_RLCK-VIIa-2 26
  - gene.Thate01g00300
  - gene.Thate01g00310
  - gene.Thate01g07320
  - gene.Thate01g19300
  - gene.Thate01g34100
  - gene.Thate01g34110
  - gene.Thate02g04290
  - gene.Thate02g06020
  - gene.Thate02g12920
  - gene.Thate02g17680
  - gene.Thate02g28860
  - gene.Thate02g33200
  - gene.Thate03g21030
  - gene.Thate04g00840
  - gene.Thate04g24020
  - gene.Thate05g25390
  - gene.Thate06g00690
  - gene.Thate06g05340
  - gene.Thate06g06090
  - gene.Thate06g15590
  - gene.Thate06g18360
  - gene.Thate08g02080
  - gene.Thate08g22210
  - gene.Thate09g00920
  - gene.Thate09g14040
  - gene.Thate09g21090
- + RLK-Pelle_RLCK-VIIb 1
  - gene.Thate03g25810
- + RLK-Pelle_RLCK-VIII 8
  - gene.Thate01g12150
  - gene.Thate01g12400
  - gene.Thate01g12410
  - gene.Thate01g27070
  - gene.Thate03g23570
  - gene.Thate06g08680
  - gene.Thate06g19200
  - gene.Thate07g00090
- + RLK-Pelle_RLCK-X 5
  - gene.Thate02g16090
  - gene.Thate02g27290
  - gene.Thate04g09050
  - gene.Thate04g09390
  - gene.Thate07g10490
- + RLK-Pelle_RLCK-XI 3
  - gene.Thate01g24720
  - gene.Thate04g09920
  - gene.Thate08g06080
- + RLK-Pelle_RLCK-XII-1 7
  - gene.Thate01g19590
  - gene.Thate02g02730
  - gene.Thate06g00100
  - gene.Thate07g02150
  - gene.Thate08g01290
  - gene.Thate08g13180
  - gene.Thate08g20230
- + RLK-Pelle_RLCK-XIII 3
  - gene.Thate01g25120
  - gene.Thate05g08180
  - gene.Thate07g03280
- + RLK-Pelle_RLCK-XV 2
  - gene.Thate01g03440
  - gene.Thate05g18560
- + RLK-Pelle_RLCK-XVI 1
  - gene.Thate08g24780
- + RLK-Pelle_SD-2b 22
  - gene.Thate01g13860
  - gene.Thate01g15560
  - gene.Thate01g21880
  - gene.Thate02g09070
  - gene.Thate02g20570
  - gene.Thate02g32480
  - gene.Thate04g04650
  - gene.Thate04g04660
  - gene.Thate04g04670
  - gene.Thate05g21580
  - gene.Thate06g14950
  - gene.Thate06g18630
  - gene.Thate06g25080
  - gene.Thate07g19770
  - gene.Thate07g19780
  - gene.Thate07g19800
  - gene.Thate07g19820
  - gene.Thate07g19830
  - gene.Thate07g19840
  - gene.Thate07g19860
  - gene.Thate07g19870
  - gene.Thate09g13110
- + RLK-Pelle_URK-1 3
  - gene.Thate03g04660
  - gene.Thate05g13950
  - gene.Thate06g10110
- + RLK-Pelle_URK-2 1
  - gene.Thate01g29490
- + RLK-Pelle_WAK 18
  - gene.Thate01g00370
  - gene.Thate01g00380
  - gene.Thate01g00420
  - gene.Thate01g00470
  - gene.Thate01g00490
  - gene.Thate01g00510
  - gene.Thate01g00540
  - gene.Thate01g01210
  - gene.Thate01g04090
  - gene.Thate04g21700
  - gene.Thate04g29170
  - gene.Thate04g29180
  - gene.Thate04g29190
  - gene.Thate04g29210
  - gene.Thate04g29230
  - gene.Thate04g29260
  - gene.Thate05g01710
  - gene.Thate05g28810
- + RLK-Pelle_WAK_LRK10L-1 5
  - gene.Thate01g27710
  - gene.Thate01g34440
  - gene.Thate02g36820
  - gene.Thate03g01070
  - gene.Thate06g13410
+ Group STE (26 genes, 6 families)
- + STE_STE-Pl 1
  - gene.Thate08g14080
- + STE_STE7 6
- + STE_STE11 14
- + STE_STE20-Fray 3
- + STE_STE20-Pl 1
  - gene.Thate02g29670
- + STE_STE20-YSK 1
  - gene.Thate05g22680
+ Group TKL (38 genes, 10 families)
- + TKL-Pl-1 2
  - gene.Thate02g01830
  - gene.Thate04g25380
- + TKL-Pl-2 1
  - gene.Thate02g20830
- + TKL-Pl-3 1
  - gene.Thate03g01980
- + TKL-Pl-4 18
- + TKL-Pl-5 3
- + TKL-Pl-6 5
- + TKL-Pl-7 1
  - gene.Thate06g02840
- + TKL_CTR1-DRK-1 2
  - gene.Thate02g22980
  - gene.Thate02g35730
- + TKL_CTR1-DRK-2 4
- + TKL_Gdt 1
  - gene.Thate07g15970