Lodging resistance genes — Protein FASTA (Reaumuria soongarica)

Download Back to table
This file does not look like a table (TSV/CSV). Showing a plain preview (first 2048 KB). 
>STRG.12567_chr02_+ seed_id=seeds|Lodging_resistance|Row8|Entry1 Gene=TaDHL StressType=Lodging resistance SeedSpecies=Triticum aestivum evalue=4.47e-128 bitscore=384.0
MVSSVEKVKLELEDYLQEEHGPLNKRHRQSSVGDQPPSGNDLFPVQPSQYNPLAEPSPLG
LRLRKSPSLLDLIQMRLSQGTSTSGSNHNQNSISKENCNTKSGSSATDKLKASNFPASLL
KIGSWEYVSRYEGDLVAKCYFAKHKLVWEILDGGLKSKIEIQWSDIMGLNASFPEDGPAT
LTVVLARKPLFFRETNPQPRKHTLWQASADFTDDQASLHRQHFLKVPHGLLNKHFEKLIQ
CDMRLNYLSQQPETVLDSPFFEPQPSASDTTSDIQNFGLDHRETGKGPNTVAVLQDVLSP
SLQQSSSSMIKQEELASTMSGPFSCEATPVSPGMDSYAVEGSKSDKLDNLKETKNWEQLI
MKGLRPSMSVNDLVNHIGNCISGEAGMEDPSFIMEGSESRKMLEDVAQCLLSDSQFSTCS
DEKSLMARVNSFYSLIQKDNPQFDGESSIGELDKEYQIDEIKLMSRVNSLCCLLQKDTSQ
FDEDSKVDTTKIGSDQSELTQTDTAKADGMTTEGRNNDFGCSNQAPSMSRIDSYGDLLLH
HLPRIASLPKFLFNISEDAEN
>STRG.1520_chr01_- seed_id=seeds|Lodging_resistance|Row10|Entry1 Gene=OsPH9 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=2.5e-67 bitscore=196.0
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
>STRG.23331_chr05_- seed_id=seeds|Lodging_resistance|Row3|Entry1 Gene=OsUBR7 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=1.98e-168 bitscore=478.0
MADAFEEETETEPTVTINEYLEDIEEQELEADLVLGGDEGKECTYSKGYMKRQAIFSCLT
CTPDGNAGICTACSLSCHDGHEILELWTKRNFRCDCGNSKFGEAFCKLLASKDVENEKNS
YNHNFKGVYCTCGRPYPDPDAEKEEEMIQCCICEDWFHDNHLGLESSEEVPRDDEGNLLY
EDLICQGCSAVCSFMTLYPNTIFVSARREEAPPSAKKQKCVAEAQLAGTSTARLENGAGS
SELLEVNDAVPSVTIECLPHEKDLVSSETSGSPSLNKCSYQVNSSAVCVLGLDLRVASPS
LERNKSMFLARGWRSSLCRCKACIDVYNQKGIGFLLDRDDSVAEYEKVAKQKREEKLQQQ
EGVELNFLNKLGHVEKMEVLSGIADMKNELQAFLASHDTSKPITAADIHDVFDNIKKRRR
EL
>STRG.23407_chr05_+ seed_id=seeds|Lodging_resistance|Row25|Entry1 Gene=ZmACS7 StressType=Lodging resistance SeedSpecies=Zea mays evalue=3.98e-210 bitscore=589.0
MKQQQGNQLLSKIAAGSGHGEDSPYFDGWKAYENDPFHPTNNPHGVIQMGLAENQLSFDL
IKEWVVNNPMASICTPEGVNAFQDTAIFQDYHGLPEFRNAIASFMKKVRGDNVEFDPDRI
VMSGGATGAHEMMAFCLADPGDAFLVPTPYYPGFDRDLRWRTGIQLLPVQCDSSNNFKLT
KTALEAAYTKAQESNIRVKGLLITNPSNPLGTILDKQTLRNIVSFINDKNIHLISDEIYA
ATVFSEPNYTSIAEIMDEQDIASTCNRDLIHIVYSLSKDMGFPGFRVGIVYSYNDAVVSC
ARKMSSFGLVSTQTQRMLAAVLSDDEFIDRYVKESRRRLASRYRVFTWGIKQVDIHCLES
NAGLFVWMDLRHLLQEKTLEAEMTLWRVIINEVKLNVSPGSSFHCDEPGWFRVCFANMDD
ETMEVALRRIRSFVMQKKEMGQKSSAGKVLSSKRKCWQNNLQLRLSNRRIEDVMMVSQGM
SPHSPMPHSPLVTS
>STRG.7349_chr04_- seed_id=seeds|Lodging_resistance|Row21|Entry1 Gene=Rht-dp StressType=Lodging resistance SeedSpecies=Triticum polonicum evalue=1.73e-208 bitscore=595.0
MKRDHQEMTHHSIPPSAPDAGEGSSSKAKIWEGGDGGGVDDELLAVLGYKVKSSDMADVA
EKLEQLEMAMCTVQEGGISHLSCDTVHYNPSDINGWLESMLSEFNPLPEQQPTLDSGAAA
SSITAIPNNNLPVVGDPFSVQLQHQSSNNSFTSTCSSSSSSSKHPPPPPVIYEDNSEYDL
RAIPGIAVYRSTDPEPDFTTTPNGYKRLKPEPSLTSSVIESLPPPPSADQTPARPLVLVD
SQETGVRLVHSLMACAEAVQNENLKLADALVKQIGLLAVSQTGAMRKVATYFAEALARRI
YKIYPQQSSVDSSYADVLQMHFYETCPYLKFAHFTANQAILDAFAGSSKVHVIDFSMKQG
MQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLAEAIGIEFHYQGFV
CDSLADLEPTMLNIKLGETVAVNSVFEFHRLLARPGAIEKVLKMVKAMKPKIVTVVEQEA
NHNGPLFLDRFNESLHYYSTLFDSLEGCGGLGGGVQEQSSSQQDVVMTEVYLGRQICNVV
ACEGIERVERHETLVQWRGRMEMAGFDPVHIGSNAFKQASMLLAWNAGGDGYRVEESNGC
LMLGWHTRPLIATSAWRVAAA
>STRG.8597_chr06_- seed_id=seeds|Lodging_resistance|Row38|Entry1 Gene=LP StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=7.15e-164 bitscore=469.0
MERDKSWVRKCHFGTTFDHGELDSFCEVSGEESKSVVSIDSALPDDLLERILANLPIAGI
FRAGCVCKRWKEIVSSERFLWNCSQVVAQKPWYFMFTSYDEPLGYAYDPALRKWYGIDLP
DFVTSNWFTASSCGLVCFMNNDDRSELHVCNPITRSCQRIVEPPAVKFSDYSTLAMSVDR
VSRSYSIAVVKSKQGLDDFFQWDVSVVVYDSESMMWVTMLAEVLTGWRGGSESVICDGVL
YFLIYFTGGGNPGSRHGLIRLDLSNRSSHGLLMEKFIPVPCSLTCGRLMNLKERLVLVGG
IGKQDRMDIIKGIGIWVLHGKEWKEVARMPHRFFQGFGEFDDVFASSGMDDLIYIQSYGA
PALLVFDINLRQWRWSQKCPVTKKFPLQLFTGFSFEPRLEIIP
>STRG.9561_chr03_+ seed_id=seeds|Lodging_resistance|Row12|Entry1 Gene=Rht5 StressType=Lodging resistance SeedSpecies=Triticum aestivum evalue=5.85e-114 bitscore=347.0
MLVKMELEFTPTAVAAACAVILCCWAWRVLKWVWLKPKKLEKCLRRQGLPGNSYRLLFGD
MKDMSRMRNEALSKPLLNFTNHTFPRVSAFLHQTINHYGNNSFVWMGPVPMLNITEPELI
REAFSRMHDFQKPKINPLVSTLVRGLASYEGEKWAKHRKLINPAFHMEKLKVMLPAFYTS
CSTMVGQWEKMIMDSGSTFQEVDVWPYLVRLSADAISRAAFGSSYEEGRRIFELLKEQTN
IVMNIVQSVYIPGWRYLPTKTNKRMKDIDKEIQTLLSGIIHKRKKETKTGMAVDDLLGIL
MDQSASFKEEGKGSKQSFGMTTKELIDECKLFYFAGQETTSVFLVWTMILLGKHQEWQTR
AREEVLKMFGRNKPEFDGLSHLKTVTMIMYEVLRLYPPVISISRRVHNDTKLGNLTLPAG
VVVNLQMMLAQHDLKIWGDDAKEFRPERFSEGISKATNGNVSFFPFGWGPRICIGQNFSL
TEAKMALVLILQRFSFELSPSYAHAPLSSITLTPQHGAQIVLHRL
>STRG.9747_chr06_- seed_id=seeds|Lodging_resistance|Row18|Entry1 Gene=GmCRY1b StressType=Lodging resistance SeedSpecies=Glycine max evalue=0.0 bitscore=1060.0
MTGGGCSIVWFRRDLRVEDNPALAAGVRAGVVIPVFIWAPEEEGHYFPGRVSRWWLKQSL
AYLDSSLKILGTSLVTKRSTDSVSCLLDVVKDTGATQIFFNHLYDPISLVRDHRAKEVLT
AHGIAVRSYNSDLLYEPWEVLDERGHPFNTFAAFWERCLSMPFDPESPLLPPKKVISGDV
SKCPADELMFEDESERGSNALLARAWSPGWSNADKALTAFVNGPLLEYSKNRGKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVMWANEGNKAGEESCNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWVIDENLFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVAS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTVPDGREFDRIDNPQFEGERSD
PNGEYVRRWLPELARLPTEWIHHPWDAPESLLQAAGIELGSNYPYPVVEIDAAEARLEEA
LSQMWQLEAASRAVMENGTEEGLGESSEAPIAFPQDLQMDIDHPPPRDNNVPATTDRRYE
DQMVPSITSSVIRMEDEEASSDLRNDSSREEVPRNLNLNQEREATNHGALHHHNVVRNNN
VATQFNGTIGRRSVEHSTAESSSTSSRGERSGGVVPVWSPSNSAFTEQFVGEDNAIAAAP
SPYLQSHPQSHQIVNWRQLSQTG
>gene_6309 seed_id=seeds|Lodging_resistance|Row11|Entry1 Gene=OsBC17 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=5.07e-157 bitscore=446.0
MRLKIFALFSLAIISYTAAYDPLDPTGNITIKWDIMSWTPDGYVAAVTVNNFQLFRHVET
PGWTIGWTWAKKEVIWNMVGAQTTEQGDCSKFKGGTIPHCCKKTPTVVDLLPGVPYNQQF
TNCCKGGVLAAWGQDPIDSVAQFQVSVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVV
PPTQFLSPDRRRKTQALMTWNVTCTYSQFLAQKNPSCCVSLSSFYNDTITPCPTCSCGCE
HKKDCIHTDTNMISLPRTHNARKDNSPLLHCTHHMCPIRIHWHVKVNYHDYWRVKISITN
FNYRKNYTQWTMVAQHPNLNNVTQVFSFNYKPLVPYASINDTGMFYGMKFYNDLIMEAGP
YGNVQSEVLLQKDKNTFTFKQGWAFPRKVYFNGAECKLPPPEQYPYLPNSGFRMRSVSVF
ISLVFSVLLVFIREGLL
>gene_6692 seed_id=seeds|Lodging_resistance|Row39|Entry1 Gene=HARDY StressType=Lodging resistance SeedSpecies=Arabidopsis thaliana evalue=4.1e-50 bitscore=160.0
MHGPRDHHPKSPNPQESSCSSPSSSSTSRPPVYKGVRRRSSGKWVSEIREPRKPNRIWLG
TYPKPEMAAVAYDVAALALKGQDAELNFPNWVSSLPVPLSNSSKDIQAAAASAAAAAGAA
ADALVGGGAGAGAGERNVVADEENVERVQGIEGEHQGFVDEDLIFDMPNVLANMAEGMLL
SPPPLGEPTADDADYACEDDNLWNYP
>gene_9065 seed_id=seeds|Lodging_resistance|Row32|Entry1 Gene=OsSUS3 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=0.0 bitscore=1251.0
MAISAAAAAKLTRVPSLKERFDDTFTGHRNEILLFLSKLEKNGKGILQHHQLIAEFDELT
SDEKQTLGEGAFGEVLRSTQEAIILPPWIGLAVRPRPGVWNYIRVNVKVLGAEELAVSDY
LHMKEELVDGTSNGNFVLELDFEPFNASIPRPTLSKSIGNGVEFLNRHLSAKMFHDKESM
APLLDFLRVHHYKGKTMMLNDRIQNLNTLQAVLRKAEEYLQNLPSETPYSEFEHKFQEIG
LERGWGDNAVSVLDMIQHLLDLLEAPDSCTLEKFLGRIPMVFNVVILSPHGYFAQANVLG
YPDTGGQVVYILDQVRALEHEMLQRIKRQGLDIVPRILIVTRLLPDAVGTTCGQRLEKVF
GTEHSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVANEISGELQAKPDLIIGNYSD
GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDINWKKVDDKYHFSCQFTADLFAMNHTDF
IITSTFQEIAGNKNTVGQYESHMNFTLPGLYRVVHGIDVFDPKFNIVSPGADLSIYFPYT
EEKKRLTALHPEIEELLFSDVENEEHLCVLKDRNKPIIFSMARLDNVKNMTGLVEWYGKN
KRLRELVNLVVVAGDRRKESKDNEEKAEMKKMHSLIETYNLNGQFRWISAQMNRVRNGEL
YRYIADTQGAFVQPAYYEAFGLTVVEAMTCGLPTFATCHGGPAEIIVHGKSGYHIDPYHG
DKAAELLVEFFEKCKDDSSHWDAISKGGLKRIEEKYTWQIYSDRLLTLAGVYGFWKYVSK
LDRREARRYLEMFYALKYRKLVSIIHSFSGWIII
>gene_8193 seed_id=seeds|Lodging_resistance|Row33|Entry1 Gene=OsCESA9 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=0.0 bitscore=1768.0
MEASAGLVAGSHNRNELVVIHGHEEPKPLKDLNGQVCEICGDEIGLTVDGDLFVACNECG
FPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDIDDIEYEFNIEDEHTKN
KHVAEAMLYGKMSYGRGTDDEENSQFPPVIAGSRSRPVSGEFPIGAHGEQLSSTLHRRVL
PYPTSEPGSARWGDRKEGGWKDQMDEWKSQQGNLGQEPDEYADQDIAMLDEARQPLSRKV
PIASSKINPYRMVIVARLAILAFFLRYRLMHPVHDAFGLWLTSVICEIWFAVSWILDQFP
KWYPIDRETYLDRLSLRYEREGEPNMLAPIDIFVSTVDPMKEPPLVTGNTVLSILAMDYP
VEKISCYISDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPENYFSQKIDYLKDKV
QPTFVKERRAMKREYEEFKVRVNALVAKSMKVPPEGWIMQDGTPWPGNNTKDHPGMIQVF
LGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNSLVRVSGVLTNAPFMLNLDCDH
YLNNSKAVREAMCFLMDPQIGKKTCYVQFPQRFDGIDKNDRYANRNTVFFDINMKGLDGI
QGPVYVGTGCVFRRQALYGYKPPRRPKRPKMVSCDCCPCFGSRRKHQKYSKHGADVEANA
DVQGFDDDQEQLISEMNFEKKFGQSAIFVTSTLMVEGGVPPSTSPAGLLKEAIHVISCGY
EDKTEWGTEIGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVL
RWALGSVEIFFSRHSPVVYGYKGGKLKWLERFAYINTTVYPFTALPLLAYCLLPAICLLT
GKFIMPTISTFASLFFIAMFISIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAV
IQGLLKVLAGIDTNFTVTSKAMDEDDEYGELYAFKWTTLLIPPTTILVINLVGVVAGISD
AINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLTGRQNRTPTIVVIWSILLASIFSLLWV
RIDPFVLKTKGPDTKQCGINC
>gene_3808 seed_id=seeds|Lodging_resistance|Row37|Entry2 Gene=ZmGA3ox2 StressType=Lodging resistance SeedSpecies=Zea mays evalue=1.13e-55 bitscore=186.0
MSTKNDLSILSPPLDFASIQRVPESHAWELHSGESLQTKSTAIYTDDDLSTLIPVVDLND
PNVVEVVGHACETLGVFQLVNHGVPDKIFDDIEFEARNLFHLPLEEKKKALRSSGAAAGY
GVLPLTPFYRKMMWCESFTMKGLSVLDDAKKIWPNDYKPFCDVMEAYQRNMKTLAGKLTN
LVVKSLNLPEETILNLTNQINDQEADNDGATLHINYYPPCPNPDLAMGAAPHTDSLLMAI
LHQAKTKDDCGNGALQVFKEGVGWIPVYLKAGALIVNVGDLLHILTNGRFHNVLHRAVIN
HDSNSDRISVVYFYGPPPHFQVTPFPITSDDKIQFRSLTVKEWSSLRWKNQRTALSHIRI
>gene_5188 seed_id=seeds|Lodging_resistance|Row2|Entry1 Gene=SD1 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=1.71e-128 bitscore=374.0
MAIDCIRRSIAQYSPMSQSPMPKQDAVNESIVFDASILRNQAEIPQQFIWPDHEKPSDRN
PRELDVPLVDLGGFLSSGRPDQSSSFNDKDRELHVAPVRQVGEACLKHGFFLVVNHGVDT
RLIKEAHNHMSMFFEQPLSMKQRAQRKLGEHCGYASSFTGRFSSKLPWKETLSFNYVSDF
QSSSKTVQQYFRNTMGEDFMESGRLYQEYCEAMNKLSLKIMELLGMSLGVEREYYREFFE
DNDSVMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDHVGGLEVFVDNEWRSIRPNLNA
FVVNIGDTFMALSNGKYKSCLHRAVVNNTSARKSLAFFLCPKKDRVVRPPNELIDDENPR
RYPDFTWPMFLEFTQKHYRADMNTLSAFSDWVKQRICTS
>gene_5826 seed_id=seeds|Lodging_resistance|Row16|Entry1 Gene=BnaC04.BIL1 StressType=Lodging resistance SeedSpecies=Brassica napus evalue=7.21e-250 bitscore=682.0
MADDKQLTAQVIDTNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCL
ETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE
SMYRVLKHYTSANQRMPLIYVKLYTYQIFRGLAYLHSVAGVCHRDLKPQNVLVDPLTHSV
KICDFGSAKVLVNGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL
FPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDL
TSRLLQYSPSLRCTALEACAHSFFDELREPNCHLPNGRPLPPLFNFKQELAGASPELISR
LIPEHMRRQYSLNLMQPAGT
>gene_17720 seed_id=seeds|Lodging_resistance|Row15|Entry1 Gene=Gn1a StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=3.58e-136 bitscore=406.0
MENITNQQMLSIFLVIFITSRLMSTLLGNIMKPKTTTLPPSKLLPPHLHVDQESISSAST
DFGKLVRATPAAVFHPTSAKDIISLVKFSYDLPISFPIAPRGRGHSVRGQAMAPKNGVVI
EMTSLNNNNCSKSIGCGPCGGSDGGDKIRVCYSRSLRGYFADVGGEQLWIDVLHGCLEYG
LAPLSWTDYLYLSVGGTLSNAGISGQTFRYGPQISNVYEMDVVTGKGEMVTCSRQMNSEL
FYAVLGGLGQFGIIIRARIALDTAPKRVKWVRMLYDDFETFTKDQEYLISIHGDMEGIFN
GLNYVEGSPIATHQGTLNNWRSSFYSSTDQSKIGSIVTPDGIIYCLELAKYYDPSGNEDV
DKELHGLFEDLNFLPGFSFTRDTSFVDFVNRVRKGELELQRKGLWDIPHPWLNIFIPKSQ
ISDFHYGIFTKILTKDSNATGPILIYPFNRKKWDDRMSAVIPEQDVVYTIGILRSSGFDD
WEVLEDQNKKIIQFCHENDIQMKQYLPHYETMEEWRNHFGSKWQRFQDRKAMFDPKKILS
PGQRIFN