HalophFGD

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Lodging resistance genes — Protein FASTA (Carallia pectinifolia)

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>nbisL1-mrna-13400 seed_id=seeds|Lodging_resistance|Row8|Entry1 Gene=TaDHL StressType=Lodging resistance SeedSpecies=Triticum aestivum evalue=2.1e-152 bitscore=447.0
MVQLMRSGNLGSEPETTASSRGNKVPVKLEIVDEDPLEEEHGPLNKRSKSSQASQQWGAG
ANAFPIPPSQYNPLDEPSPLGLRLRKSPSLLDLIQMRLSQGNAPVNGGQQNENHNSGSKK
ESKGTAASGSTDKLKASNFPASILRIGSWEYKSRYEGDLVAKCYFAKHKLVWEVLEGGLK
SKIEIQWSDIMALKANCAEDGPGTLDVALARQPLFFRETNPQPRKHTLWQATADFTNGQA
SIHRKHFLQCPQGLVNRHFEKLIQCDMRLNFLSRQPEIILDSPYFDQRPSIFEDPDESKD
QVETGRGSSMSGFQGLASPSAGHSSSLEIEKGDLAGATSEHTSREAPSPSSVMDNRAIEG
SGNCEAVTSMGLRNWDQIKVPGLHPSMSMTDFMNHIGNCLSEQMTSGNASFSADGSECQG
ILEDIAQYLLSDAQITASSDEKRLMARVNSLYCLLQKDPSAQNLQINEGSYPEECDLGKG
IQQNHTNELLQDNRSRMDSKAPEGNAKEVSGSKQAPGMSRKDSFGELLLHLPRIASLPKI
LFNISEDDGDSQAR
>nbisL1-mrna-15266 seed_id=seeds|Lodging_resistance|Row11|Entry1 Gene=OsBC17 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=9.18e-155 bitscore=441.0
MKLEKETMKQESFKQNFKITKIDDGKAASDVAMYLCATAYDPLDPNGNITVKWDIMSWTV
DGYTAVVTINNFQMFRHIMYPGWTLGWTWAKKEIIWSMSGAQATEQGDCSKFKANIPHCC
KRSPAVVDLLPNVPYNQQFTNCCKSGVVAAWGQDPSASVSQFQIIVGLSGTSNKTVKLPK
NFTLLGPGPGYTCGPAKVVPSTKIPTPDPRRKIQALLTWNVTCTYSQFRARKNPNCCVSF
SSFYSKTITPCPSCACGCQNNNTCVQNDDKILQLKGIDNTTRKENSPLLQCTHHMCPVRV
HWHVKLNYKDYWRVKIAMTNFNYGMNYSTWTLVIQHPNLNNVTQVFSFEYKPLVPYKSIN
DTGMFYGMKYYNDLLMEAGPSGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPP
PDTYPFLPNLAGRSLLSLSTLISATFLLLICICACCLGKVTADLKKDF
>nbisL1-mrna-11765 seed_id=seeds|Lodging_resistance|Row16|Entry1 Gene=BnaC04.BIL1 StressType=Lodging resistance SeedSpecies=Brassica napus evalue=8.44e-254 bitscore=694.0
MASVPLGPPSHHHHHQPEPAPPPPQPSAPPPLPAADNDPLSIHHRRSNMDPDKEMSTTVI
EGKDAVTGHIISTTIGGKNGEPKRTITYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVL
QDRRYKSRELQLMRLMDHPNVVSLKHCFFSTTSRDELFLNLVMEYVPETMYNVLEHYSST
NQRMPLIYVKLYAYQIFRGLGYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV
RGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE
IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVLNKQMPPEAIDLVSRLIQYSPSLR
CTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELQVAGASPELINRLMPEHVRRQA
GLSFLHPASA
>nbisL1-mrna-9493 seed_id=seeds|Lodging_resistance|Row18|Entry1 Gene=GmCRY1b StressType=Lodging resistance SeedSpecies=Glycine max evalue=0.0 bitscore=1131.0
MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKHSL
AHLDSSLRSLGTSLVTKRSTDTVSTLLEVVKSTGATQLFFNHLYDPLSLVRDHRAKEVLT
AHGIAVRSFNADLLYEPWDVNDVGGRPFTTFAAFWERCLSMPYDPEAPLLPPKRIISGDV
SKCPSDVLIFEDELEKGSNALLARAWSPGWSSADKALTSFLNGPLIEYSKNRRKADSATT
SFLSPHLHFGELSVRKVFHLVCIRQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH
PYSLERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDHPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGIDAAKVRLQQA
LSEMWQQEAASRAVVENGTEEGLGDSSESPPIAFPQDMQMEEGQEPVRDNPPATTLRYED
QMVPSMTSSLVRVEEEETLDVQNIREDSRAEVPRNINVNQEPRRDTLNQDATRNIHSNNN
TFPHFNFMTGLGDAEDSTAESSSSSRRERDGGVVPVWSPPSSSYPEQYSGDENRIGTSSY
LQRHPQSHQSINWRQLSQTG
>nbisL1-mrna-4232 seed_id=seeds|Lodging_resistance|Row39|Entry1 Gene=HARDY StressType=Lodging resistance SeedSpecies=Arabidopsis thaliana evalue=8.05e-58 bitscore=180.0
MQSQPSKTTSPSSSSSSGSGASGAVAPAVSGRRPVYRGVRRRSSGKWVSEIREPRKPTRI
WLGTFPTPEMAAVAYDVAALALKGHDAELNFPNTAASLPVPASTSPRDIQAAAASAAAAI
GAAKDALGIVDQVEISPTVQENNSNQIMQGTRPMDDAFVDEDLIFDMPNVLMNMAEGMLL
SPPRLDIAGDDSVNENTGPGDHNLWKFP
>nbisL1-mrna-30246 seed_id=seeds|Lodging_resistance|Row10|Entry1 Gene=OsPH9 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=3.4e-67 bitscore=196.0
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
>nbisL1-mrna-22384 seed_id=seeds|Lodging_resistance|Row25|Entry1 Gene=ZmACS7 StressType=Lodging resistance SeedSpecies=Zea mays evalue=6.52e-213 bitscore=596.0
MVFELNNQLLSKIATSNGHGEDSPYFDGWKAYDSDPYHPTKNPNGVIQMGLAENQLCFDL
VQEWLKTNPKASICTAEGVKEFRDIAIFQDYHGLAEFRKAVAKFMGKVRGDRVTFEPDRV
VMSGGATGANEMIGFCLANPGDAFLVPTPYYPGFDRDLRWRTGIKIIPVECESCNNFKVT
REALESAYEMAQLDNIRVKGLLFTNPSNPLGSILDRETLRSIVNFVNEKNIHLVCDEIYA
ATVFSRPDFISIAEILEEEDIDCNLDLIHIVYSLSKDMGFPGFRVGIVYSYNDAVVNCAR
KMSSFGLVSSQTQHLIASMLSDDEFVDRYIAESKKRLAKRHRVLTQGLAQVGIKCLKTGN
AVLFVWMDLRRLLKEQTFEAEMALWRVIINEVKLNVSPGSSFHCSEPGWFRVCFANIDDN
TVEVALARIRTFVLQNKEAMKPVKKLCWQGSIKLSFNSRICDDFLVSPHSPRPQSPLVHA
RT
>nbisL1-mrna-1208 seed_id=seeds|Lodging_resistance|Row21|Entry1 Gene=Rht-dp StressType=Lodging resistance SeedSpecies=Triticum polonicum evalue=1.08e-215 bitscore=614.0
MKRGYQGSYGGGRAESSSSSSMAAACNGKGKLWEDEKDPGGVDELLAVLGYKVRSSDMAD
VAQKLEQLEVVMGTAQEDGISHLCDTIHYNPSDLSGWVQSMLSELHNPPPLPAPPRSGLD
VSSASSSASVLQDRSNPIQQDSLLGSVSTINFSDPQSQQSGVFADDSEYDLRAIPGVAAY
PPQESGRENCRKRTKTSVGSTATNSNSSIASSSPSPSLPPPPQTIPVPVTLPSESTRPVV
LIDSQETGVRLVHTLLACAEAVQQENFKLADALVKHIGLLAASQAGAMRKVATYFAEALA
RRIYKIYPQDCLDPSYSDALEMHFYETCPYLKFAHFTANQAILEAFANESRVHVVDFGLK
QGMQWPALMQALALRPGGPPAFRLTGIGPPQPNNTDTLQQVGWKLAQLAETIGVEFEFRG
FVASSLADLEPEMLDLRPTEVEAVAVNSVLELHRLLARPGGIDKVLSSIKAMKPKIVTIV
EQEADHNRPVFLDRFTESLHYYSSLFDSLEGSGLEPVSQDLVMSELYLGKQICNVLASEG
PDRVERHEPLTQWRTRMESAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEESNGCLMLG
WHTRPLIATSAWRLAA
>nbisL1-mrna-10792 seed_id=seeds|Lodging_resistance|Row38|Entry1 Gene=LP StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=5.54e-176 bitscore=501.0
MAGETSWTGDFVDDVVRDIGESDSFSELSDEGNREINAVSVDVILPDDLLERILAHLPIA
SIVRVGSVCKRWHEIVKSRRFLWNSFHVLTQKPWYFMFTSSDEPVGYAYDPMLRKWYGID
LPCIRTSNWFIASSCGLVCFMDNDSRSELYVCNPITKCYRQLVEPPGLKFSDYSALAISA
NRKSHDYSITIVKSKQIPGNFFQWDLSIHTYKSGPRTWVTSWTEVLTGWRAGNDSVICGG
ILYFLIYTTGGGAPTNRHGLIPYNLSGRSPHKLLIKGFIPVPCPLTCGRLMNVKEKLVMV
GGIGKHERPDIIKGIGIWVLKGKEWEEVSRMPHKLFQGFGEFDDVFASSGTDDLIYIHSY
GAPSLLAFDMNQRQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP
>nbisL1-mrna-28036 seed_id=seeds|Lodging_resistance|Row37|Entry2 Gene=ZmGA3ox2 StressType=Lodging resistance SeedSpecies=Zea mays evalue=3.67e-72 bitscore=229.0
MPSRLAEAFRAHPVHLHHKHLDFTSFQELPDSYRWTQLDEDWPSSGGPFVSESVPVIDLL
DPNALQNIGFACKTWGVFQVINHGIPTSLIDNAEGACRSLFSLPIQQKLKAARSPDGISG
YGLARISTFFPKLMWSEGFTIVGSPLEHFRQLWPHDYTKFCDIIGEYDKEMENLAGRLMW
LMLGSLGVTKEDVKWASPRSESKEGCSALQLNHYPACPDPDRAMGLAAHTDSTLLTILYQ
NSTSGLQVQREGTGWVTVPPIQGGLVINVGDLLHILSNGLYPSVLHRAVVNRTKHRLSIA
YLYGPPSSVQISPLAKLVGPSQPPLYRPVTWNEYLGTKAKHFNKALSWVRLCAPLNGLVD
VI
>nbisL1-mrna-12619 seed_id=seeds|Lodging_resistance|Row2|Entry1 Gene=SD1 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=1.63e-129 bitscore=377.0
MAIDCIKTKPLIPHQPPKDDRKDEQNQKPLVFDAKVLRYQSNIPEQFIWPDHEKPRVYAP
ELPVPLIDLGGFLLGDPAAAMEASRLVGEACRKHGFFLVVNHGVDKKLIADAHRHMETFF
ELPLCEKQKAQRRTGEHCGYASSFTGRFSSKLPWKETLSFRYSAEDKSAKIVQDYLLRKM
GQDFAEFGRVYQEYCEAMSTLSLGIMELLGISLGVSRTHFREFFQENDSIMRLNYYPPCQ
KPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWRSITPNFESFVVNLGDTFMALSNG
RYKSCLHQAVVNSETPRKSLAFFLCPRNDKMVTPPTELVDSCHPRIYPDFTWPMLLEFTQ
KHYRADMKTLEMFTNWVQQRST
>nbisL1-mrna-12998 seed_id=seeds|Lodging_resistance|Row15|Entry1 Gene=Gn1a StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=1.16e-148 bitscore=438.0
MAQSFTIPTYFLVLLLVTRLMSSTGNSKSWTNLLTPYDNNLQTVNFSDRLRADQDAIESA
SRDYGNIVHQKPAAVLYPSSVQDIVSLVKFAYSNHAAPFTIAAKGRGHSVRGQAMAYKGV
VVDMMSLRSHKKGPGSRSVTVSKSPVVGLSYADVGGEQLWIDVLHATMEHGLAPLSWTDY
LYLSVGGTLSNAGISGQTFRYGPQISNVHEMDVLTGKGELVTCSENKNSELFYAVFGGLG
QFGIITRARIPLELAPKRVKWVRMLYNDFSAFTTDQERLISNNGRKQKNALDFLEGSLLL
NQGPPNNWRSSFFPPSEIQRVMSLVTQHGIIYCLEVAKYYDDLSQQTIDKEMKQMFKGLH
FVDGFVFEKDVSFVDFLDRVRSGELKLQAKGLWEVPHPWLNLFIPKSRISDFNSGVFRDI
VLRRNITTGPVLVYPMNRDKWDDRTSAVIPDEDIFYTVGFLHSGGYDNWKAFDDQNEELL
KFCDEAGIEVKQYFPHYTTKEEWIGHFGSKWRTFRERKARFDPKLMLSPGQRIFSEF
>nbisL1-mrna-13182 seed_id=seeds|Lodging_resistance|Row12|Entry1 Gene=Rht5 StressType=Lodging resistance SeedSpecies=Triticum aestivum evalue=5.84e-118 bitscore=358.0
MEEGLFLYWVKWVAISFLVLVLVLKIAVLLWWRPRRIEEHFAKQGIRGPPYRFFIGNVKE
VVEMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLAVSDPDLIREIF
TSKSEYYEKVEAHPLIKKLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVARSVT
DMLDQWSEMSNSGSEEVEIEVSEWFQTLTEDVILRTAFGSSYEDGKAIFRLQAQQMLLAA
EAFQKVFIPGYRFLPTKTNMNSWKLDKEIKKSLTKLIDCRKENSGKGQGSNKTTSTTTTV
LQEKGPKDLLGLMIQASNSCPNHVTVPDIVEECKTFFFAGKQTTSNLLTWTTVLLAMHPH
WQVLARDEVLRVCGSRDIPTKDDIVKLKTLTMILNESLRLYPPTIATIRRSKTDVELGGY
KIPRGTELLIPILALHHDHTIWGNDANEFNPGRFADGVARAAKHPGAFIPFGLGVRTCIG
QNLAILQAKLTLAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFHRLSNTMIHQDQG
S
>nbisL1-mrna-25825 seed_id=seeds|Lodging_resistance|Row32|Entry1 Gene=OsSUS3 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=0.0 bitscore=1249.0
MAERVLTRVQSIRERLDNTLANHRNEIVTFLTRIEGKGKGILQRHHVVAEYEAIPEETRK
KLVDGAFAEVLRSTQEAIVLPPLVVFAVRPRPGVWEYIRVNVHALVVEELQVSEYLHFKE
ELVNGSSNGNLTLELDFEPFNASFPRPTISKYIGNGVEFLNRHLSAKLFHDKESLHPLLQ
FLRVHCHKGKSMMLNDRIQNLNSLQHVLHKAEEYLITLPPKTPYSQFEHKFQEIGLEGGW
GDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVIMTPHGFFAQDNVLGYPDTG
GQVVYILDQVRALETEMLQRIKQQGLDITPRILVITRLLPDAVGTTCGQRLEKVFGTEYS
DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAAEISKELQGKPDLIIGNYSDGNIVA
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNHTDFIITST
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTQEKRR
LTSFHPEIEELLYSQVENEEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNKRLRE
LVNLVVVGGDRRKESKDLEEQAEMKKMYALIEQYNLNGQFRWISSQMNRVRNGELYRCIC
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIVVHGKSGFHIDPYHGDQAAE
LLVDFFEKCKADPSHWDTISQGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRE
SRRYLEMFFALKYRKLAQSVPLTIE
>nbisL1-mrna-22327 seed_id=seeds|Lodging_resistance|Row3|Entry1 Gene=OsUBR7 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=1.88e-170 bitscore=483.0
MADAFDDENEQTITIDEYLNKVEAEELEADLVLGGDEGKECTYTMSYMKRQAIFSCLTCT
PDGNAGVCTACSLSCHDGHEIVELWTKRNFRCDCGNSKFGESFCKLFPKKDVENTENSYN
HNFKGLYCTCDRPYPDPNVEEQEEMIQCVVCEDWFHEEHLGLESSNEIPRDEEGEPMYED
FICKACSAVCSFLSLYPQTIWAGQSDDAVLSAGKDKNVMEDLNSACDAANIENNSSSYGS
SSKENSSGNANCESISTGEASVTRESSEKNISSDRCTKDAIHPTTCVLGDDVVVTSAVLE
SKPLFLSKGWRDILCRCEKCLDVYNQKKICYLLDEDDSIAEYEKIAKQKREEKLQQQEGD
ELNFLNKLGHVEKMEVLSGLADFKDEFRSFLESFDTSKTITSSDVQQIFENLAKKRRRVQ
>nbisL1-mrna-25328 seed_id=seeds|Lodging_resistance|Row33|Entry1 Gene=OsCESA9 StressType=Lodging resistance SeedSpecies=Oryza sativa evalue=0.0 bitscore=1834.0
MEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEIGLTVDGDLFVACNECG
FPVCRPCYEYERREGTQNCPQCKTRYKRLKGSPRVQGDEDEEDVDDIEHEFNMEDEQEKN
NHLTEAMLQGKMTYGRGHGDEENAQFPPVITGVRSRPVSGEFPIGANGDPMLPASLHKRV
HPYPVSEPGSARWDEKKEGGWKERMDEWKLQQGNLGPEAEDDPDAAMIDEARQPLSRKVP
IASSKINPYRMVIVARLVILAFFLRYRLLNPVHDAIGLWLTSVVCEIWFAFSWILDQFPK
WFPIDRETYLDRLSLRYEREGEPNMLAPVDIFVSTVDPMKEPPLVTGNTILSILAMDYPV
EKISCYLSDDGASMCTFEAMSETAEFARKWVPFCKKHSIEPRAPEMYFTLKVDYLKDKVQ
PTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFL
GHSGGHDTEGNELPRLVYVSREKRPGFAHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHY
VNNSKAVREAMCFLMDPQLGKRVCYIQFPQRFDGIDRNDRYANRNTVFFDINMKGLDGIQ
GPVYVGTGCVFKRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKNKFSTNGANNGSANLQG
IDDDKELLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSASPAALLKEAIHVISCGYEDKT
DWGSELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL
GSVEIFFSRHSPVWYGYKEGKLKWLERFAYVNTTVYPFTSLPLLAYCTLPAICLLTDKFI
MPEISTFASLFFIALFISIFATGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGL
LKVLAGIDTNFTVTSKATDDEEFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNG
YQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPF
VLKTKGPDTKQCGINC
>nbisL1-mrna-16280 seed_id=seeds|Lodging_resistance|Row5|Entry1 Gene=Rht-D1b StressType=Lodging resistance SeedSpecies=Triticum aestivum evalue=8.2e-217 bitscore=617.0
MKRGHEGSYGGATGYGGGGGGGGRAESSSMAASKGKLWKDEQDPGGMDELLAVLGYKVRS
SDMADVAQKLEQLEMVMGTAQEEGITHLSDTIHYNPSDLSGWVQSMLSELNSPPLPHSGL
DVSSPSSSASVLQQDRTIQRDSLLGSSSTIDFSNPQSHQSTGAFTDDSEYDLRAIPGVAA
YPPPPELDRENSWKRSKTSAGSTATNSNSSIASSASPLLPPPPAPTAIPVSTESTRPVVL
IDSQETGVRLVHTLLACAEAVQQESFKLADALVKHIRLLAASQAGAMRKVATYFAEALAR
RIYKIYPQDCLVPSYSDTLEMHFYETCPYLKFAHFTANQAILEAFATESRVHVIDFGLKQ
GMQWPALLQALALRPGGPPAFRLTGIGPPQPDKTDTLQQVGWRLAQLAETIGVEFEFRGF
VASSLADLDPEMLELRPTEVEAVAVNSVFELHRLLARPGGIDKVLSSIKAMKPKIVTIVE
QEANHNCPVFLDRFTEALHYYSSLFDSLEGSGLAPPSQDLVMSELYLGKQICNVLACEGP
DRVERHETLTQWRTRMNSTGFDLVHLGSNAFKQASMLLALFAGGDGYRVEESDGCLMLGW
HTRPLIATSAWRLAGDGSQQ
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