Basic Information
Locus ID:
scaffold145098G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold145098 | 102 | 1663 | - | scaffold145098G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 44,396.17 Da | 46.09 | 102.42 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 73 | 3.5E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 393 | 6.01E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 398 | 1.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 210 | 7.0E-27 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 430 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_010916143.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Elaeis guineensis] | 0 |
| TrEMBL | A0A6I9QW16 | LRR receptor-like serine/threonine-protein kinase ERL1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology