Basic Information
Locus ID:
scaffold062488G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold062488 | 4907 | 6214 | - | scaffold062488G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 46,332.31 Da | 29.45 | 100.48 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 62 | 2.0E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 339 | 427 | 6.0E-10 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 208 | 2.72E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 433 | 9.82E-19 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 217 | 4.8E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 409 | 6.9E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 335 | 435 | 12.881035 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 162 | 184 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 341 | 363 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_010910915.1 | probable inactive receptor kinase At1g48480 [Elaeis guineensis] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QK06 | probable inactive receptor kinase At1g48480 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105036890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology