Basic Information
Locus ID:
scaffold056537G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold056537 | 5126 | 7347 | + | scaffold056537G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 62,576.63 Da | 59.61 | 54.97 | -1.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 467 | 551 | 3.2E-19 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 467 | 552 | 5.0E-28 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 217 | - | - |
| Coils | Coil | Coil | 466 | 493 | - | - |
| Coils | Coil | Coil | 505 | 525 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.2 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_010921486.1 | titin homolog [Elaeis guineensis] | 0 |
| TrEMBL | A0A6I9R8D3 | titin homolog OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105045024 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology