Basic Information
Locus ID:
scaffold045783G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold045783 | 29095 | 39361 | - | scaffold045783G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 93,408.86 Da | 45.51 | 80.61 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 411 | 709 | 1.02073E-115 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 717 | 780 | 2.8E-18 | IPR002495 |
| Pfam | PF01501 | Glycosyl transferase family 8 | 380 | 695 | 7.3E-87 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 716 | 803 | 3.66E-15 | IPR029044 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 411 | 717 | 1.15E-62 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 413 | 714 | 8.9E-41 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 715 | 797 | 2.5E-8 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 197 | - | - |
| Coils | Coil | Coil | 200 | 220 | - | - |
| Coils | Coil | Coil | 341 | 361 | - | - |
| Coils | Coil | Coil | 293 | 313 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38270.2 | galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_019705550.2 | probable galacturonosyltransferase 3 [Elaeis guineensis] | 0 |
| Q0WQD2 | Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0PHD6 | Hexosyltransferase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105042659 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology