Basic Information
Locus ID:
scaffold035301G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold035301 | 73742 | 78548 | + | scaffold035301G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 70,327.82 Da | 38.34 | 95.67 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 134 | 193 | 3.2E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 82 | 2.2E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 316 | 581 | 2.2E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 215 | 6.8E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 591 | 2.47E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 604 | 2.2E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 391 | 3.2E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 224 | 2.1E-57 | IPR032675 |
| SMART | SM00220 | serkin_6 | 315 | 570 | 1.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 315 | 570 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 321 | 343 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 434 | 446 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_010927978.1 | protein NSP-INTERACTING KINASE 1 isoform X1 [Elaeis guineensis] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9RKZ7 | protein NSP-INTERACTING KINASE 1 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105049893 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology