Basic Information
Locus ID:
scaffold030283G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Src homology-3 domain protein 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold030283 | 34793 | 39077 | - | scaffold030283G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 25,649.76 Da | 47.86 | 82.03 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 165 | 213 | 2.8E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 142 | 218 | 2.23E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 5 | 114 | 3.59E-12 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 4 | 132 | 6.2E-6 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 149 | 225 | 6.2E-16 | - |
| SMART | SM00326 | SH3_2 | 161 | 216 | 4.5E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 158 | 217 | 19.122732 | IPR001452 |
| Coils | Coil | Coil | 42 | 69 | - | - |
| Coils | Coil | Coil | 5 | 32 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.2 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_010919378.1 | SH3 domain-containing protein 2 isoform X2 [Elaeis guineensis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9R8Q3 | SH3 domain-containing protein 2 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105043505 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology