Basic Information
Locus ID:
scaffold020982G000040
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold020982 | 29019 | 33197 | - | scaffold020982G000040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.54 | 31,962.75 Da | 44.24 | 94.70 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 106 | 140 | 1.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 102 | 139 | 4.41E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 147 | 223 | 9.42E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 260 | 4.9E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 96 | 138 | 3.3E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27290.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_010932307.1 | F-box protein SKIP14 [Elaeis guineensis] | 0 |
| Q9LK24 | F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9RUY9 | F-box protein SKIP14 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105053007 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology