Basic Information
Locus ID:
scaffold020226G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
SOS2
Description:
CBL-interacting protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold020226 | 7161 | 15012 | + | scaffold020226G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 22,568.11 Da | 52.32 | 80.85 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 80 | 5.9E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 149 | 3.24E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 191 | 7.5E-36 | - |
| SMART | SM00220 | serkin_6 | 1 | 145 | 2.6E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 200 | 18.803179 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 31 | 43 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.2 | - | 0 |
| RefSeq | XP_029117295.1 | CBL-interacting protein kinase 24 isoform X3 [Elaeis guineensis] | 0 |
| Q69Q47 | CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8N4EQZ6 | CBL-interacting protein kinase 24 isoform X3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105033980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | scaffold020226G000020 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G57565.1 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0488s00002.v1.0 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G000800 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13616 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g07320, gene.Posoc10g10730 |