Basic Information
Locus ID:
scaffold017325G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold017325 | 55024 | 56943 | - | scaffold017325G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 67,923.98 Da | 44.20 | 109.28 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 235 | 258 | 0.13 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 37 | 86 | 1.24E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 170 | 635 | 1.27E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 440 | 1.1E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 441 | 637 | 2.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 288 | 4.0E-31 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 474 | 499 | 2.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 501 | 526 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 528 | 553 | 6.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 342 | 367 | 2.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 210 | 235 | 1.3E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 368 | 393 | 6.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 606 | 631 | 290.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 262 | 287 | 0.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 554 | 578 | 82.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 448 | 473 | 2.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 394 | 419 | 370.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 184 | 209 | 0.041 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 236 | 261 | 0.06 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_010907279.1 | EIN3-binding F-box protein 1 [Elaeis guineensis] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QDJ6 | EIN3-binding F-box protein 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105033977 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology