Basic Information
Locus ID:
scaffold017314G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold017314 | 3712 | 7678 | + | scaffold017314G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 70,231.23 Da | 36.74 | 96.65 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 387 | 644 | 4.99011E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 3.6E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 387 | 643 | 1.7E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 643 | 1.59E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 208 | 9.78E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 237 | 5.7E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 459 | 647 | 3.1E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 352 | 457 | 5.0E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 647 | 27.410786 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010910517.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Elaeis guineensis] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QJE0 | probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105036447 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology