Basic Information
Locus ID:
scaffold017116G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold017116 | 44591 | 47793 | - | scaffold017116G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 113,680.22 Da | 37.92 | 98.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 709 | 988 | 2.59236E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 88 | 144 | 1.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 572 | 1.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 81 | 1.1E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 705 | 983 | 5.0E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 256 | 276 | 1.3 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 987 | 7.65E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 88 | 468 | 9.42E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 398 | 606 | 6.8E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 299 | 1.1E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 997 | 3.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 389 | 2.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 196 | 1.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 686 | 783 | 1.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 390 | 489 | 1.5E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 490 | 627 | 1.6E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 511 | 535 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 132 | 155 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 253 | 277 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 0.79 | IPR003591 |
| SMART | SM00220 | serkin_6 | 703 | 993 | 7.0E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 987 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 709 | 734 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 559 | 572 | 3.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 110 | 123 | 3.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010915378.1 | receptor-like protein kinase HSL1 isoform X1 [Elaeis guineensis] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QZ23 | receptor-like protein kinase HSL1 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105040519 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology