Basic Information
Locus ID:
scaffold016239G000100
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold016239 | 272416 | 277231 | + | scaffold016239G000100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 70,756.05 Da | 45.02 | 88.54 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01501 | Glycosyl transferase family 8 | 322 | 563 | 2.3E-61 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 352 | 563 | 9.56E-45 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 357 | 570 | 5.3E-30 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 202 | - | - |
| Coils | Coil | Coil | 231 | 251 | - | - |
| Coils | Coil | Coil | 283 | 303 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_010942526.1 | probable galacturonosyltransferase 4 isoform X2 [Elaeis guineensis] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9SG74 | Hexosyltransferase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105060491 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology