Basic Information
Locus ID:
scaffold015002G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold015002 | 141823 | 149467 | - | scaffold015002G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 57,929.51 Da | 41.52 | 84.78 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 391 | 462 | 3.8E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 49 | 373 | 4.8E-65 | IPR000490 |
| SUPERFAMILY | SSF55920 | Creatinase/aminopeptidase | 2 | 38 | 6.12E-5 | IPR036005 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 49 | 373 | 7.73E-77 | IPR017853 |
| Gene3D | G3DSA:3.90.230.10 | Creatinase/methionine aminopeptidase superfamily | 1 | 47 | 2.9E-6 | IPR036005 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 48 | 378 | 2.7E-103 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 384 | 489 | 1.7E-11 | - |
| SMART | SM00768 | X8_cls | 390 | 475 | 4.7E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 287 | 300 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010923875.1 | glucan endo-1,3-beta-glucosidase 1 [Elaeis guineensis] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A6I9RBM6 | glucan endo-1,3-beta-glucosidase 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105046839 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology