Basic Information
Locus ID:
scaffold012094G000040
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold012094 | 203628 | 204353 | + | scaffold012094G000040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 26,018.69 Da | 22.14 | 103.19 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 122 | 162 | 2.6E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 198 | 218 | 0.56 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 73 | 2.7E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 219 | 9.07E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 147 | 7.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 239 | 1.7E-16 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_010929417.1 | pollen receptor-like kinase 1 [Elaeis guineensis] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9RMY8 | pollen receptor-like kinase 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105050896 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology