Basic Information
Locus ID:
scaffold009298G000060
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold009298 | 155864 | 197375 | + | scaffold009298G000060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 202,994.77 Da | 34.31 | 92.38 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1529 | 1795 | 7.10472E-91 | - |
| CDD | cd14066 | STKc_IRAK | 786 | 1052 | 7.3313E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 784 | 1048 | 3.9E-47 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1526 | 1790 | 1.6E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 1089 | 1318 | 5.1E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 765 | 1069 | 2.7E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 194 | 581 | 5.1E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1508 | 1812 | 5.93E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1066 | 1203 | 5.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 432 | 564 | 4.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 431 | 5.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1495 | 1598 | 5.9E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 856 | 1065 | 6.6E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1599 | 1802 | 2.6E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 752 | 855 | 2.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 332 | 1.9E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1204 | 1360 | 6.0E-17 | IPR032675 |
| SMART | SM00220 | serkin_6 | 780 | 1053 | 3.1E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 1234 | 1258 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 413 | 436 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1180 | 1204 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1156 | 1179 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 461 | 485 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1523 | 1798 | 2.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 780 | 1053 | 37.785141 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1523 | 1797 | 38.124359 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1643 | 1655 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1529 | 1551 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 900 | 912 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 786 | 808 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1809 | 1844 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1809 | 1834 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010930348.3 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Elaeis guineensis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9RYE8 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105051547 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology