Basic Information
Locus ID:
scaffold009168G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
C-terminal to LisH motif.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold009168 | 109999 | 110629 | - | scaffold009168G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 20,921.87 Da | 53.96 | 95.89 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 13 | 51 | 0.0014 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 5 | 174 | 7.87E-24 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 181 | 5.2E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 95 | 133 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 12 | 51 | 6.5E-4 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G08560.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_020270326.1 | WD repeat-containing protein 26-like isoform X3 [Asparagus officinalis] | 0 |
| Q9FNN2 | WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR26 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EIF4 | WD repeat-containing protein 26 homolog OS=Asparagus officinalis OX=4686 GN=A4U43_C06F390 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology