Basic Information
Locus ID:
scaffold007735G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like protein kinase At2g42960
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold007735 | 18678 | 26458 | + | scaffold007735G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 61,886.17 Da | 33.22 | 94.56 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 195 | 474 | 2.8877E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 190 | 444 | 7.2E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 173 | 491 | 5.13E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 171 | 264 | 1.6E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 265 | 486 | 2.8E-63 | - |
| SMART | SM00220 | serkin_6 | 189 | 473 | 1.3E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 189 | 483 | 38.322235 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 195 | 218 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 311 | 323 | - | IPR008271 |
| Coils | Coil | Coil | 209 | 229 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010926408.1 | probable receptor-like protein kinase At2g42960 isoform X2 [Elaeis guineensis] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9RH19 | probable receptor-like protein kinase At2g42960 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105048695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology