Basic Information
Locus ID:
scaffold007358G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold007358 | 64625 | 90897 | + | scaffold007358G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 105,328.23 Da | 43.84 | 86.03 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 759 | 913 | 2.2543E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 313 | 912 | 1.4E-85 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 41 | 137 | 2.1E-23 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 311 | 914 | 5.89E-111 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 137 | 1.44E-28 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 717 | 922 | 6.1E-57 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 12 | 150 | 1.7E-35 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 302 | 523 | 2.6E-67 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 239 | 6.3E-16 | - |
| SMART | SM00695 | dusp | 37 | 140 | 5.9E-27 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 137 | 19.200605 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 313 | 915 | 58.485706 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 314 | 329 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 857 | 874 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_010908130.1 | ubiquitin carboxyl-terminal hydrolase 9 [Elaeis guineensis] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9QEK9 | Ubiquitin carboxyl-terminal hydrolase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105034613 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology