Basic Information
Locus ID:
scaffold006704G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold006704 | 17509 | 25980 | - | scaffold006704G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 104,830.99 Da | 35.68 | 86.65 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 528 | 709 | 6.4E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 12 | 28 | 0.0015 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 295 | 328 | 5.7E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 799 | 907 | 6.24E-12 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 12 | 396 | 1.84E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 508 | 709 | 2.16E-60 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 416 | 1.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 290 | 7.9E-72 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 604 | 715 | 6.7E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 603 | 2.4E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 921 | 1.2E-17 | - |
| SMART | SM00220 | serkin_6 | 527 | 903 | 1.5E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 101 | 126 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 77 | 100 | 7.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 354 | 378 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 527 | 903 | 36.781628 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 56 | 78 | 7.480934 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 533 | 554 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 651 | 663 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010917500.1 | receptor-like kinase TMK4 [Elaeis guineensis] | 0 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9R448 | receptor-like kinase TMK4 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105042100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology