Basic Information
Locus ID:
scaffold004540G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
CIPK23
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold004540 | 40278 | 45474 | + | scaffold004540G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 42,598.47 Da | 29.89 | 85.38 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 249 | 364 | 1.88972E-48 | - |
| Pfam | PF03822 | NAF domain | 245 | 305 | 1.1E-20 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 60 | 204 | 3.9E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 212 | 1.13E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 5 | 53 | 2.3E-9 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 242 | 368 | 8.2E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 54 | 228 | 9.2E-55 | - |
| SMART | SM00220 | serkin_6 | 12 | 204 | 5.2E-48 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 243 | 267 | 11.91618 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 204 | 25.926716 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 86 | 98 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 18 | 41 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30270.2 | - | 0 |
| RefSeq | XP_010923725.1 | CBL-interacting protein kinase 23 [Elaeis guineensis] | 0 |
| Q6ZLP5 | CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK23 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9RB83 | non-specific serine/threonine protein kinase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105046735 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology