Basic Information
Locus ID:
scaffold004123G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold004123 | 44664 | 48864 | - | scaffold004123G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 19,779.49 Da | 50.72 | 94.89 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 51 | 7.6E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 54 | 2.7E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 65 | 2.2E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 184 | 13.418126 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 20 | 32 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80870.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_019705365.1 | receptor-like serine/threonine-protein kinase At2g45590 [Elaeis guineensis] | 0 |
| Q9SAH3 | Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana OX=3702 GN=At1g80870 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8K0N5F1 | Putative receptor-like serine/threonine-protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_07G014200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 8 | COCNU_03G000690, COCNU_07G014200, scaffold000579G000010 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2221.V1.1 |