Basic Information
Locus ID:
scaffold003874G000030
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
- CK1 includes the casein kinase 1 kinases, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold003874 | 115383 | 124444 | + | scaffold003874G000030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 70,247.01 Da | 50.51 | 71.53 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 162 | 320 | 1.1E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 162 | 355 | 2.73E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 250 | 322 | 1.7E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 154 | 249 | 4.5E-26 | - |
| SMART | SM00220 | serkin_6 | 162 | 366 | 2.7E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 162 | 466 | 14.676052 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 168 | 201 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 289 | 301 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 113 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_010936995.2 | casein kinase 1-like protein HD16 isoform X1 [Elaeis guineensis] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9S4E3 | casein kinase 1-like protein HD16 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105056479 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology