Basic Information
Locus ID:
scaffold003476G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold003476 | 195300 | 196269 | - | scaffold003476G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 32,081.81 Da | 45.61 | 95.41 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 6 | 239 | 2.9E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 243 | 1.09E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 45 | 264 | 1.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 44 | 6.5E-10 | - |
| SMART | SM00220 | serkin_6 | 1 | 243 | 1.6E-12 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 2 | 254 | 8.7E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 243 | 31.325903 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 90 | 102 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 0 |
| RefSeq | XP_010905307.2 | PTI1-like tyrosine-protein kinase At3g15890 [Elaeis guineensis] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9Q9Q0 | PTI1-like tyrosine-protein kinase At3g15890 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105032543 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology