Basic Information
Locus ID:
scaffold003371G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold003371 | 29398 | 35667 | - | scaffold003371G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 53,194.82 Da | 35.04 | 96.40 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 360 | 431 | 5.5E-17 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 22 | 342 | 1.1E-81 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 22 | 343 | 7.43E-85 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 21 | 348 | 6.7E-116 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 447 | 6.3E-9 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 2.6E-46 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_019704428.1 | glucan endo-1,3-beta-glucosidase 3 [Elaeis guineensis] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0PFW7 | glucan endo-1,3-beta-glucosidase 3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041086 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology