Basic Information
Locus ID:
scaffold001699G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001699 | 621706 | 624319 | - | scaffold001699G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 53,293.83 Da | 36.25 | 85.99 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 12 | 329 | 1.8E-54 | IPR000490 |
| Pfam | PF07983 | X8 domain | 347 | 418 | 4.2E-16 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 12 | 331 | 4.46E-59 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 11 | 338 | 2.9E-87 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 343 | 433 | 3.0E-8 | - |
| SMART | SM00768 | X8_cls | 346 | 431 | 1.0E-39 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_008777062.1 | glucan endo-1,3-beta-glucosidase 4-like isoform X2 [Phoenix dactylifera] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BI47 | glucan endo-1,3-beta-glucosidase 4-like isoform X2 OS=Phoenix dactylifera OX=42345 GN=LOC103697069 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology