Basic Information
Locus ID:
scaffold001322G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001322 | 100873 | 108587 | + | scaffold001322G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 97,178.23 Da | 42.77 | 88.26 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 586 | 863 | 3.00409E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 66 | 5.5E-7 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 332 | 367 | 7.9E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 581 | 867 | 1.0E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 556 | 870 | 6.26E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 452 | 2.3E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 324 | 1.4E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 329 | 454 | 1.3E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 657 | 883 | 3.8E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 544 | 656 | 9.6E-31 | - |
| SMART | SM00220 | serkin_6 | 580 | 877 | 6.0E-46 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 115 | 138 | 0.23 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 417 | 439 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 164 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 211 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 393 | 416 | 190.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 580 | 872 | 41.530651 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 704 | 716 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 586 | 608 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 481 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010908591.1 | receptor-like kinase TMK4 [Elaeis guineensis] | 0 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A068EUD3 | Leucine-rich repeat receptor-like protein kinase OS=Cocos nucifera OX=13894 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology