Basic Information
Locus ID:
scaffold001310G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001310 | 775426 | 779687 | + | scaffold001310G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 147,151.80 Da | 51.28 | 81.03 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 684 | 932 | 2.02041E-132 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1077 | 1341 | 8.5E-128 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 715 | 849 | 1.3E-26 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 707 | 873 | 4.63E-20 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 686 | 934 | 1.3E-59 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 595 | 1349 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 712 | 941 | 30.385015 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 322 | - | - |
| Coils | Coil | Coil | 1028 | 1048 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_029117925.1 | translocase of chloroplast 159, chloroplastic isoform X1 [Elaeis guineensis] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8N4ES29 | translocase of chloroplast 159, chloroplastic isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105035939 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology