Basic Information
Locus ID:
scaffold001198G000040
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001198 | 89037 | 95228 | + | scaffold001198G000040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 128,448.81 Da | 45.51 | 73.18 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 905 | 1117 | 3.49147E-92 | - |
| CDD | cd06410 | PB1_UP2 | 168 | 264 | 3.75911E-45 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 901 | 1119 | 7.4E-52 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 181 | 265 | 8.3E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 886 | 1127 | 2.32E-67 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 180 | 272 | 1.23E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 882 | 1155 | 3.3E-69 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 183 | 265 | 4.8E-12 | - |
| SMART | SM00220 | serkin_6 | 899 | 1152 | 5.3E-44 | IPR000719 |
| SMART | SM00666 | PB1_new | 179 | 266 | 1.9E-32 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 899 | 1162 | 37.742741 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1024 | 1036 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 905 | 930 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 157 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010924148.1 | uncharacterized protein LOC105047056 isoform X2 [Elaeis guineensis] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9RJC2 | uncharacterized protein LOC105047056 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105047056 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology