Basic Information
Locus ID:
scaffold000650G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000650 | 141249 | 146349 | + | scaffold000650G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 68,478.84 Da | 37.32 | 82.25 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 281 | 579 | 1.75586E-110 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 250 | 565 | 2.0E-82 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 281 | 587 | 2.42E-62 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 283 | 583 | 4.1E-39 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 74 | - | - |
| Coils | Coil | Coil | 167 | 194 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38270.2 | galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_029119703.1 | probable galacturonosyltransferase 3 isoform X1 [Elaeis guineensis] | 0 |
| Q0WQD2 | Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8N4F217 | Hexosyltransferase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105042660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology