Basic Information
Locus ID:
scaffold000579G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000579 | 315590 | 322872 | + | scaffold000579G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 24,473.12 Da | 44.07 | 107.76 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 62 | 158 | 3.4E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 162 | 2.16E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 39 | 177 | 5.1E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 210 | 16.131853 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45590.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_019705365.1 | receptor-like serine/threonine-protein kinase At2g45590 [Elaeis guineensis] | 0 |
| O64639 | Receptor-like serine/threonine-protein kinase At2g45590 OS=Arabidopsis thaliana OX=3702 GN=At2g45590 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0PGJ3 | receptor-like serine/threonine-protein kinase At2g45590 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105043218 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 8 | COCNU_03G000690, COCNU_07G014200, scaffold000579G000010 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2221.V1.1 |