Basic Information
Locus ID:
scaffold000534G000020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000534 | 151914 | 169687 | - | scaffold000534G000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 22,149.08 Da | 38.68 | 116.36 | 0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 7 | 194 | 1.7E-9 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 5 | 187 | 3.79E-18 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 2 | 191 | 1.2E-15 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010943478.1 | hippocampus abundant transcript 1 protein [Elaeis guineensis] | 0 |
| TrEMBL | A0A6I9SIN6 | hippocampus abundant transcript 1 protein OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105061202 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology