Basic Information
Locus ID:
populus_peu38158
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold172 | 60553 | 61911 | + | populus_peu38158 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 48,923.75 Da | 31.89 | 114.60 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 2 | 309 | 5.4E-32 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 363 | 413 | 1.7E-17 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 1 | 356 | 3.3E-68 | - |
| PIRSF | PIRSF006060 | AA_transporter | 2 | 362 | 4.0E-47 | - |
| PIRSF | PIRSF006060 | AA_transporter | 343 | 433 | 0.74 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.2 | - | 0 |
| RefSeq | XP_011023494.1 | PREDICTED: cationic amino acid transporter 1-like [Populus euphratica] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1Y078 | AA_permease_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G030900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology