Basic Information
Locus ID:
populus_peu37652
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold51 | 29716 | 34810 | + | populus_peu37652 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 41,779.02 Da | 52.38 | 99.64 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 1 | 338 | 1.3E-146 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1 | 317 | 1.17E-124 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 337 | 2.5E-146 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 1 | 353 | 3.0E-178 | IPR002554 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25510.1 | Protein phosphatase 2A regulatory B subunit family protein. | 0 |
| RefSeq | XP_011010867.1 | PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like, partial [Populus euphratica] | 0 |
| Q93YV6 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Arabidopsis thaliana OX=3702 GN=B'KAPPA PE=1 SV=1 | 0 | |
| TrEMBL | B9ILI0 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Populus trichocarpa OX=3694 GN=POPTR_018G072900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology