Basic Information
Locus ID:
populus_peu37452
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold716 | 19494 | 20625 | - | populus_peu37452 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 33,941.88 Da | 42.13 | 86.23 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 2 | 150 | 9.2E-55 | IPR027356 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 1 | 174 | 63.314526 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 310 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_011011590.1 | PREDICTED: BTB/POZ domain-containing protein NPY4-like [Populus euphratica] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2YTT1 | NPH3 domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_010629 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology