Basic Information
Locus ID:
populus_peu37407
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold331 | 17579 | 21996 | + | populus_peu37407 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 45,051.77 Da | 54.27 | 59.93 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 178 | 223 | 2.3E-15 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 303 | 356 | 2.5E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 298 | 358 | 1.57E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 177 | 224 | 1.57E-15 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 175 | 224 | 4.6E-15 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 293 | 359 | 8.5E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 170 | 224 | 8.1E-17 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 298 | 357 | 3.1E-33 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 178 | 225 | 14.010525 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 300 | 358 | 34.164841 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 278 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_011013412.1 | PREDICTED: probable WRKY transcription factor 3 isoform X1 [Populus euphratica] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2ATH3 | WRKY transcription factor 3 OS=Populus trichocarpa OX=3694 GN=POPTR_004G120800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology