Basic Information
Locus ID:
populus_peu37385
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
CKA2
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold283 | 16435 | 19345 | + | populus_peu37385 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 27,728.82 Da | 42.25 | 92.04 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 159 | 235 | 1.5E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 235 | 1.01E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 158 | 235 | 1.7E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 86 | 146 | 2.3E-15 | - |
| SMART | SM00220 | serkin_6 | 95 | 230 | 2.2E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 95 | 235 | 23.552204 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 101 | 124 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 185 | 197 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67380.1 | casein kinase alpha 1. casein kinase II catalytic subunit alpha | 0 |
| RefSeq | XP_011006794.1 | PREDICTED: casein kinase II subunit alpha-like isoform X1 [Populus euphratica] | 0 |
| Q08467 | Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=CKA1 PE=1 SV=3 | 0 | |
| TrEMBL | U5G4U8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G052800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology