Basic Information
Locus ID:
populus_peu36641
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 17719113 | 17725732 | + | populus_peu36641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 159,852.06 Da | 52.22 | 81.41 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 177 | 644 | 1.66E-41 | IPR016024 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1349 | 1500 | 8.7E-7 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 168 | 465 | 5.0E-52 | IPR011989 |
| SMART | SM00185 | arm_5 | 292 | 332 | 61.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 209 | 250 | 63.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 335 | 373 | 8.7 | IPR000225 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1068 | 1107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1215 | 1243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1220 | 1243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1001 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 931 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1073 | 1107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 931 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1017 | 1031 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 704 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_011046281.1 | PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Populus euphratica] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7Z5L9 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_033514 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology