Basic Information
Locus ID:
populus_peu36560
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 17210206 | 17213406 | - | populus_peu36560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 15,086.21 Da | 44.55 | 81.14 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 131 | 7.8E-53 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 6 | 107 | 8.4E-46 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 131 | 5.3E-5 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_011047239.1 | PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X2 [Populus euphratica] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2WGY6 | Ubiquitin fusion degradation protein 1 homolog OS=Populus deltoides OX=3696 GN=H0E87_031332 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology