Basic Information
Locus ID:
populus_peu36543
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 17083707 | 17087524 | - | populus_peu36543 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 41,214.17 Da | 40.17 | 73.96 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 309 | 357 | 1.7E-9 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 258 | 6.7E-25 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 268 | 360 | 1.84E-15 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 45 | 268 | 1.7E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 291 | 368 | 4.3E-14 | - |
| SMART | SM00326 | SH3_2 | 305 | 360 | 2.5E-10 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 302 | 361 | 17.458811 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 279 | - | - |
| Coils | Coil | Coil | 149 | 176 | - | - |
| Coils | Coil | Coil | 220 | 240 | - | - |
| Coils | Coil | Coil | 186 | 213 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_011047486.1 | PREDICTED: endophilin-A1 [Populus euphratica] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2XZD7 | SH3 domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_017226 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology