HalophFGD

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Basic Information
Locus ID: populus_peu36433
Species & Taxonomic ID: Populus euphratica & 75702
Genome Assembly: GWHAAYU00000000
Description: Pfam:DUF3633
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 16230756 16239511 + populus_peu36433
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.71 43,014.46 Da 44.15 77.11 -0.52
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12315 Protein DA1 156 365 2.2E-55 IPR022087
SMART SM00726 uim 7 26 77.0 IPR003903
SMART SM00726 uim 34 53 0.44 IPR003903
ProSiteProfiles PS50330 Ubiquitin-interacting motif (UIM) domain profile. 34 53 9.416349 IPR003903
Best hit
Source Best Hit ID Description E-value
TAIR AT1G19270.1 DA1. 0
RefSeq XP_011004812.1 PREDICTED: protein DA1-like [Populus euphratica] 0
Swiss-Prot P0C7Q8 Protein DA1 OS=Arabidopsis thaliana OX=3702 GN=DA1 PE=1 SV=1 0
TrEMBL B9HRS3 DA1-like domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G111500 PE=4 SV=2 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 2 Ag9G00325, Ag9G00326
Salicaceae Populus euphratica 1 populus_peu36433
Solanaceae Lycium barbarum 3 gene-LOC132598786, gene-LOC132598787, gene-LOC132600180
Solanaceae Solanum chilense 2 SOLCI001226000, SOLCI001226100
Solanaceae Solanum pennellii 2 gene-LOC107008085, gene-LOC107008119
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.