Basic Information
Locus ID:
populus_peu36091
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 13921543 | 13925234 | - | populus_peu36091 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 45,460.53 Da | 34.97 | 80.49 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01491 | Ube1_repeat1 | 81 | 333 | 9.273E-138 | - |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 328 | 397 | 1.6E-23 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 256 | 327 | 3.5E-29 | IPR032418 |
| Pfam | PF00899 | ThiF family | 83 | 231 | 3.0E-28 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 75 | 389 | 9.16E-84 | IPR035985 |
| Gene3D | G3DSA:3.40.50.12550 | - | 191 | 404 | 9.4E-33 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 244 | 323 | 7.1E-30 | IPR042302 |
| Gene3D | G3DSA:3.50.50.80 | - | 73 | 190 | 8.0E-38 | IPR042449 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 218 | 245 | 1.6E-26 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 103 | 127 | 1.6E-26 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_011003628.1 | PREDICTED: ubiquitin-activating enzyme E1 1-like isoform X2 [Populus euphratica] | 0 |
| P93028 | Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana OX=3702 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5PWC1 | E1 ubiquitin-activating enzyme OS=Populus alba OX=43335 GN=D5086_0000168710 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology