Basic Information
Locus ID:
populus_peu35870
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 12171211 | 12173183 | - | populus_peu35870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 14,813.64 Da | 46.00 | 84.92 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 56 | 131 | 3.5E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 130 | 1.66E-18 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 132 | 6.7E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 132 | 13.813878 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_034896539.1 | calcium-dependent protein kinase 8-like [Populus alba] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5P7L8 | Calcium-dependent protein kinase 1 OS=Populus alba OX=43335 GN=D5086_0000220790 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg16308 |
| Arecaceae | Cocos nucifera | 3 | scaffold014035G000030, scaffold014035G000040 ... |
| Posidoniaceae | Posidonia oceanica | 14 | gene.Posoc01g21110, gene.Posoc02g09000, gene.Posoc02g20180 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.1078 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-15578 |
| Salicaceae | Populus euphratica | 1 | populus_peu35870 |
| Zosteraceae | Zostera marina | 1 | Zosma03g11290.v3.1 |