Basic Information
Locus ID:
populus_peu35869
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 12167986 | 12171130 | - | populus_peu35869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 39,592.68 Da | 42.81 | 88.31 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 253 | 315 | 1.74707E-16 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 252 | 315 | 1.1E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 182 | 241 | 8.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 1 | 154 | 5.6E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 177 | 4.86E-53 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 164 | 337 | 3.06E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 159 | 4.2E-54 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 160 | 318 | 4.0E-43 | - |
| SMART | SM00054 | efh_1 | 181 | 209 | 0.011 | IPR002048 |
| SMART | SM00054 | efh_1 | 217 | 245 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 253 | 281 | 0.16 | IPR002048 |
| SMART | SM00220 | serkin_6 | 1 | 154 | 7.2E-15 | IPR000719 |
| SMART | SM00054 | efh_1 | 289 | 317 | 6.1E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 249 | 284 | 12.030714 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 213 | 248 | 9.21328 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 285 | 320 | 14.178661 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 177 | 212 | 12.337564 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 154 | 33.488407 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 226 | 238 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 16 | 28 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 262 | 274 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 298 | 310 | - | IPR018247 |
| Coils | Coil | Coil | 199 | 219 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.2 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_011025545.1 | PREDICTED: calcium-dependent protein kinase 8-like [Populus euphratica] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | B9HNX4 | Calcium-dependent protein kinase OS=Populus trichocarpa OX=3694 GN=POPTR_009G052700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology