Basic Information
Locus ID:
populus_peu35264
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 27972654 | 27975284 | - | populus_peu35264 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 52,983.22 Da | 40.32 | 79.94 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 22 | 340 | 6.0E-77 | IPR000490 |
| Pfam | PF07983 | X8 domain | 356 | 427 | 2.3E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 22 | 340 | 4.12E-79 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 351 | 452 | 1.7E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 21 | 350 | 4.0E-111 | - |
| SMART | SM00768 | X8_cls | 355 | 440 | 6.4E-43 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_011025159.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Populus euphratica] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2BAQ9 | glucan endo-1,3-beta-D-glucosidase OS=Populus trichocarpa OX=3694 GN=POPTR_003G218500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology