Basic Information
Locus ID:
populus_peu35263
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 27960842 | 27962795 | - | populus_peu35263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 38,753.46 Da | 38.57 | 69.97 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 118 | 158 | 1.7E-8 | IPR006652 |
| Pfam | PF00646 | F-box domain | 10 | 50 | 2.5E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 161 | 206 | 7.2E-12 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 85 | 277 | 1.96E-40 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 52 | 1.09E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 46 | 305 | 5.7E-41 | IPR015915 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 1.4E-5 | IPR001810 |
| SMART | SM00612 | kelc_smart | 172 | 219 | 2.2E-9 | IPR006652 |
| SMART | SM00612 | kelc_smart | 123 | 171 | 6.1E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011025165.1 | PREDICTED: F-box/kelch-repeat protein At2g44130-like [Populus euphratica] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | B9GY86 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G218400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology